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  5. Sam_g49468

Sam_g49468


Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49468
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00210070 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.02 OrthoFinder output from all 47 species
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.02 OrthoFinder output from all 47 species
AT4G38000 DOF4.7 DNA binding with one finger 4.7 0.03 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.02 OrthoFinder output from all 47 species
Aev_g39679 CDF1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08641 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67430 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013604 TMO6 transcription factor *(DOF) & original description: CDS=1-1641 0.02 OrthoFinder output from all 47 species
Azfi_s1074.g096912 TMO6 transcription factor *(DOF) & original description: CDS=1-1176 0.03 OrthoFinder output from all 47 species
Ceric.14G083700.1 OBP4, Ceric.14G083700 transcription factor *(DOF) & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g13892 OBP1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26661 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005057001 TMO6 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01008156001 OBP4 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01016538001 OBP3 RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01019619001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
GSVIVT01021086001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
LOC_Os03g16850.1 OBP3, LOC_Os03g16850 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g47990.1 LOC_Os04g47990 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g02150.1 OBP3, LOC_Os05g02150 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os07g32510.1 TMO6, LOC_Os07g32510 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os08g38220.1 LOC_Os08g38220 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Len_g15959 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26281 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05846 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41458 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61765 DAG1 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g077950.3.1 Solyc02g077950 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc02g077960.3.1 TMO6, Solyc02g077960 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc03g112930.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc04g070960.3.1 Solyc04g070960 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc05g054510.2.1 OBP3, Solyc05g054510 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc06g071480.3.1 HCA2, DOF5.6,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc06g076030.3.1 Solyc06g076030 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc08g082910.2.1 Solyc08g082910 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc09g010680.3.1 Solyc09g010680 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc10g009360.4.1 DAG1, Solyc10g009360 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc10g086440.2.1 DOF2.4,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Solyc11g066050.1.1 Solyc11g066050 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc11g072500.2.1 TMO6, Solyc11g072500 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Spa_g31006 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54524 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006527_P001 Zm00001e006527 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e015414_P004 Zm00001e015414 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e015597_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e023334_P001 HCA2, DOF5.6,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e027634_P002 OBP3, Zm00001e027634 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e035074_P001 TMO6, Zm00001e035074 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e038479_P002 OBP3, Zm00001e038479 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e041444_P001 Zm00001e041444 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 269 325
No external refs found!