Lfl_g30316

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g30316
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
AT2G34200	No alias	RING/FYVE/PHD zinc finger superfamily protein	0.03	OrthoFinder output from all 47 species
Azfi_s1320.g101441	No alias	E3 ubiquitin ligase & original description: CDS=1-1113	0.03	OrthoFinder output from all 47 species
Dac_g20996	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_352312g0010	No alias	RING-v-class E3 ligase	0.03	OrthoFinder output from all 47 species
Pir_g01780	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009961	No alias	E3 ubiquitin ligase & original description: CDS=391-1818	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	190	237

External Links

No external refs found!