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  5. Sam_g49643

Sam_g49643


Description : not classified & original description: none


Gene families : OG0000049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g49643
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0038.g026242 No alias not classified & original description: CDS=198-1145 0.03 OrthoFinder output from all 47 species
Ceric.1Z215700.1 FXG1, ATFXG1,... not classified & original description: pacid=50634934... 0.02 OrthoFinder output from all 47 species
Dde_g02165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007554001 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_16009 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_25827 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11730.1 LOC_Os01g11730 GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g46120.1 LOC_Os01g46120 GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g04240.1 LOC_Os05g04240 GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g11970.1 LOC_Os05g11970 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g47910.1 LOC_Os06g47910 GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g44780.1 LOC_Os07g44780 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g25400.1 LOC_Os10g25400 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_42044g0010 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_8577882g0010 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g22200.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ppi_g33078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo90062 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc05g013680.3.1 Solyc05g013680 GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e016451_P001 Zm00001e016451 Sinapine esterase OS=Brassica napus... 0.02 OrthoFinder output from all 47 species
Zm00001e020310_P001 Zm00001e020310 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e020311_P002 Zm00001e020311 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0009374 biotin binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0033293 monocarboxylic acid binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 44 141
No external refs found!