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  5. Sam_g50420

Sam_g50420


Description : anion transporter *(NRT1/PTR) & original description: none


Gene families : OG0000021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50420

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00186p00036810 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
Ala_g27675 No alias anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05087 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08452 PTR1, ATPTR1 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13710.t1 Aspi01Gene13710 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33748.t1 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0048.g030530 No alias anion transporter *(NRT1/PTR) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g11244 No alias anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021037.32 No alias Solute transport.carrier-mediated transport.MFS... 0.02 OrthoFinder output from all 47 species
Dac_g33374 NRT1.5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08830 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g20929 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12615 NRT1.5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g34000.1 LOC_Os05g34000 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
LOC_Os10g02240.1 ATPTR2, PTR2,... anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Lfl_g08494 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40537 NRT1.7 anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_139294g0010 PTR5, ATPTR5 anion transporter (NRT1/PTR) 0.02 OrthoFinder output from all 47 species
Ore_g20611 No alias anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26292 ATPTR2, PTR2,... anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18937 No alias anion transporter *(NRT1/PTR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05863 PTR5, ATPTR5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004033 NRT1.1, B-1,... anion transporter *(NRT1/PTR) & original description: CDS=1-1845 0.02 OrthoFinder output from all 47 species
Tin_g15185 PTR5, ATPTR5 anion transporter *(NRT1/PTR) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR000109 POT_fam 127 549
No external refs found!