Sam_g50768


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g50768

Target Alias Description ECC score Gene Family Method Actions
AT5G39350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g11596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20072 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32661 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25829 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30199 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25195 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05393.t1 Aspi01Gene05393 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06316.t1 Aspi01Gene06316 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09926.t1 CRR22, Aspi01Gene09926 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10387.t1 REME1, Aspi01Gene10387 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10779.t1 CRR22, Aspi01Gene10779 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13090.t1 Aspi01Gene13090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27421.t1 Aspi01Gene27421 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28610.t1 REME1, Aspi01Gene28610 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30154.t1 Aspi01Gene30154 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31317.t1 CRR28, Aspi01Gene31317 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33080.t1 Aspi01Gene33080 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34036.t1 CRR22, Aspi01Gene34036 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34548.t1 Aspi01Gene34548 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34713.t1 Aspi01Gene34713 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34727.t1 Aspi01Gene34727 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34785.t1 Aspi01Gene34785 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34786.t1 Aspi01Gene34786 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34884.t1 Aspi01Gene34884 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38545.t1 Aspi01Gene38545 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41775.t1 Aspi01Gene41775 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41783.t1 Aspi01Gene41783 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44213.t1 Aspi01Gene44213 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49892.t1 Aspi01Gene49892 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54043.t1 Aspi01Gene54043 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55895.t1 Aspi01Gene55895 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56180.t1 EMB2758, Aspi01Gene56180 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64480.t1 Aspi01Gene64480 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71401.t1 REME1, Aspi01Gene71401 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000903 EMB2261 not classified & original description: CDS=1-2043 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009385 No alias not classified & original description: CDS=1-2319 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044009 No alias not classified & original description: CDS=1-2178 0.05 OrthoFinder output from all 47 species
Azfi_s0154.g053510 No alias not classified & original description: CDS=1-2550 0.03 OrthoFinder output from all 47 species
Cba_g05567 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07024 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26848 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46020 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g67793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g69713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g72718 MEF21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29399 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39652 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07716 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19456 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38468 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g40545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18520 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18788 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44381 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56629 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Msp_g15571 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44820 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35704 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23074 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g52997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53953 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56161 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000052 EMB2758 not classified & original description: CDS=1-1683 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000505 CRR2 not classified & original description: CDS=1-1110 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008413 No alias not classified & original description: CDS=1-1578 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008527 OTP84 borate transporter *(BOR) & original description: CDS=118-8541 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011866 No alias not classified & original description: CDS=1-2421 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013907 No alias not classified & original description: CDS=1-1875 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018468 No alias solute transporter *(MTCC) & original description: CDS=2675-4273 0.02 OrthoFinder output from all 47 species
Sam_g02496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11177 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g18645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26535 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39629 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g40204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g005170.3.1 Solyc07g005170 Pentatricopeptide repeat-containing protein At1g09410,... 0.03 OrthoFinder output from all 47 species
Tin_g44227 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 12 59
IPR002885 Pentatricopeptide_repeat 114 161
No external refs found!