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  5. Sam_g51361

Sam_g51361


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51361

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00015910 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G52800 No alias A20/AN1-like zinc finger family protein 0.04 OrthoFinder output from all 47 species
AT4G12040 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g011055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g043904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25155.t1 Aspi01Gene25155 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z032000.1 Ceric.1Z032000 not classified & original description: pacid=50577072... 0.03 OrthoFinder output from all 47 species
Dac_g10909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g57890.1 LOC_Os03g57890 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os08g39450.1 LOC_Os08g39450 Zinc finger A20 and AN1 domain-containing... 0.07 OrthoFinder output from all 47 species
LOC_Os09g31200.1 LOC_Os09g31200 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Len_g03084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g28090.1 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Msp_g35953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006081 No alias not classified & original description: CDS=1-825 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013142 No alias not classified & original description: CDS=1-786 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013704 No alias not classified & original description: CDS=1-681 0.02 OrthoFinder output from all 47 species
Smo150464 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Solyc01g086960.3.1 Solyc01g086960 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Solyc11g061770.2.1 Solyc11g061770 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Spa_g12005 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034520_P001 Zm00001e034520 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 50 87
No external refs found!