Sam_g51509


Description : bHLH-type transcription factor & original description: none


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51509

Target Alias Description ECC score Gene Family Method Actions
AT1G68810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G40200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G25710 BHLH32, ATAIG1, TMO5 basic helix-loop-helix 32 0.02 OrthoFinder output from all 47 species
Dcu_g02891 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020688001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01032789001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
LOC_Os05g07120.1 LOC_Os05g07120 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Pir_g00619 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0153.g023505 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Solyc05g009880.3.1 Solyc05g009880 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc07g053290.3.1 Solyc07g053290 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Spa_g13095 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004145_P001 Zm00001e004145 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 170 216
No external refs found!