Sam_g51682

Description : component *(NF-YA) of NF-Y transcription factor complex & original description: none

Gene families : OG0000451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000451_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g51682

Target	Alias	Description	ECC score	Gene Family Method
AT1G72830	HAP2C, NF-YA3, ATHAP2C	nuclear factor Y, subunit A3	0.01	OrthoFinder output from all 47 species
Cba_g17685	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Ceric.29G048400.1	NF-YA9, Ceric.29G048400	component *(NF-YA) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
GSVIVT01025252001	HAP2A, ATHAP2A,...	RNA biosynthesis.transcriptional activation.NF-Y...	0.02	OrthoFinder output from all 47 species
LOC_Os12g42400.2	NF-YA10, LOC_Os12g42400	component NF-YA of NF-Y transcription factor complex	0.02	OrthoFinder output from all 47 species
MA_17313g0010	NF-YA7	component NF-YA of NF-Y transcription factor complex	0.02	OrthoFinder output from all 47 species
Pir_g37638	HAP2C, NF-YA3, ATHAP2C	component *(NF-YA) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Pnu_g32852	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Zm00001e005004_P001	NF-YA10, Zm00001e005004	component NF-YA of NF-Y transcription factor complex	0.02	OrthoFinder output from all 47 species
Zm00001e005342_P003	NF-YA7, Zm00001e005342	component NF-YA of NF-Y transcription factor complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007030	Golgi organization	IEP	HCCA
CC	GO:0008023	transcription elongation factor complex	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
CC	GO:0070449	elongin complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001289	NFYA	166	221

External Links

No external refs found!