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  5. Sam_g51844

Sam_g51844


Description : H-type thioredoxin *(Trx-H) & original description: none


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g51844
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT1G69880 TH8, ATH8 thioredoxin H-type 8 0.04 OrthoFinder output from all 47 species
Adi_g097947 ATTRX4, ATH4 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g22114 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43276 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32942 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04612 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45663 TRXH2, TRX2,... H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11387 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42704 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62735.t1 ATH9, TH9, TRX... H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035450 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: CDS=7-366 0.03 OrthoFinder output from all 47 species
Cba_g52701 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Cre09.g391900 ATTRX4, ATH4 Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.02 OrthoFinder output from all 47 species
Cre12.g554850 TRXH2, TRX2,... Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.02 OrthoFinder output from all 47 species
Dcu_g24755 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g27634 ATTRX4, ATH4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14455 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
MA_167813g0010 ATCXXS1, CXXS1 H-type thioredoxin 0.05 OrthoFinder output from all 47 species
MA_7727794g0010 ATCXXS1, CXXS1 H-type thioredoxin 0.05 OrthoFinder output from all 47 species
Mp3g04870.1 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin 0.03 OrthoFinder output from all 47 species
Mp5g19690.1 ATH9, TH9, TRX H9 H-type thioredoxin 0.03 OrthoFinder output from all 47 species
Nbi_g21956 ATH5, ATTRX5, TRX5, LIV1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37663 ATTRX1, ATTRX H1, TRX1 H-type thioredoxin *(Trx-H) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021990 No alias not classified & original description: CDS=31-402 0.03 OrthoFinder output from all 47 species
Solyc05g006870.3.1 TRXH2, TRX2,... H-type thioredoxin 0.02 OrthoFinder output from all 47 species
Solyc09g015820.3.1 ATH9, TH9, TRX... H-type thioredoxin 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 27 125
No external refs found!