Sam_g51880

Description : not classified & original description: none

Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g51880

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00012240	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s00215p00017850	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s01072p00000950	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
AMTR_s02052p00000390	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AT1G17840	ATWBC11, ABCG11,...	white-brown complex homolog protein 11	0.02	OrthoFinder output from all 47 species
Adi_g077367	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g084035	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g04432	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene53383.t2	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0123.g048394	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=209-2359	0.05	OrthoFinder output from all 47 species
Dac_g22000	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g15896	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01015767001	ATWBC11, ABCG11,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_14532	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Gb_18403	ATWBC11, ABCG11,...	suberin/cutin lipid exporter (DSO). wax lipid exporter...	0.02	OrthoFinder output from all 47 species
LOC_Os07g18874.1	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Len_g14462	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Len_g30376	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g40842	ATWBC11, ABCG11,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10436774g0020	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_170430g0020	ATWBC11, ABCG11,...	ABC transporter G family member 11 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp4g11430.1	ATWBC11, ABCG11,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Pnu_g01678	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000545	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=630-2756	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004346	ATWBC11, ABCG11,...	not classified & original description: CDS=5-1900	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008822	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=1-2235	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019973	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: CDS=1-2280	0.02	OrthoFinder output from all 47 species
Sam_g09328	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo234186	ATWBC11, ABCG11,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Spa_g15429	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g16828	ATWBC11, ABCG11,...	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0009916	alternative oxidase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	99	144

External Links

No external refs found!

Sam_g51880

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation