Sam_g52092


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52092

Target Alias Description ECC score Gene Family Method Actions
AT3G15130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004372 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004512 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005730 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033552 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055145 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g061193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075672 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076457 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095301 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096243 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42949 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19006 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28684 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30517.t1 CRR22, Aspi01Gene30517 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45318.t1 Aspi01Gene45318 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65602.t1 Aspi01Gene65602 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013569 No alias not classified & original description: CDS=1-2385 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g060017 No alias not classified & original description: CDS=1-2076 0.02 OrthoFinder output from all 47 species
Cba_g03910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G007900.1 Ceric.20G007900 not classified & original description: pacid=50566810... 0.02 OrthoFinder output from all 47 species
Ceric.20G079700.1 DOT4, Ceric.20G079700 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G062800.1 Ceric.21G062800 not classified & original description: pacid=50603272... 0.03 OrthoFinder output from all 47 species
Ceric.30G012500.1 Ceric.30G012500 not classified & original description: pacid=50608997... 0.03 OrthoFinder output from all 47 species
Ceric.33G052800.1 Ceric.33G052800 not classified & original description: pacid=50607149... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g04265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g44734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15555 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09249 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032950001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Len_g02897 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g44860 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g00845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_174226g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_470679g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.02 OrthoFinder output from all 47 species
MA_62181g0010 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_73205g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Msp_g03562 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15026 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27922 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12550 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22601 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000958 No alias not classified & original description: CDS=1-3216 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004386 No alias not classified & original description: CDS=1-2367 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005530 CRR22 not classified & original description: CDS=1-2547 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010124 No alias ssDNA-binding protein *(OSB) & original description: CDS=208-2547 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026116 No alias not classified & original description: CDS=1-2901 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026669 No alias not classified & original description: CDS=1-2394 0.02 OrthoFinder output from all 47 species
Sam_g24177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo75659 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Spa_g05915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41043 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 122
IPR002885 Pentatricopeptide_repeat 279 323
IPR002885 Pentatricopeptide_repeat 177 225
IPR002885 Pentatricopeptide_repeat 380 428
IPR002885 Pentatricopeptide_repeat 457 481
IPR002885 Pentatricopeptide_repeat 50 71
IPR002885 Pentatricopeptide_repeat 253 275
No external refs found!