Description : assembly factor (eIF1A) of eIF1 & original description: none
Gene families : OG0002330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002330_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Lfl_g30569 | |
| Cluster | HCCA: Cluster_49 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00059p00147020 | evm_27.TU.AmTr_v1... | Protein biosynthesis.translation... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g024760 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g113565 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g00112 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g08163 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g49264 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g69160 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G042100.1 | Ceric.22G042100 | assembly factor (eIF1A) of eIF1 & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_29651 | No alias | assembly factor (eIF1A) of eIF1 | 0.03 | OrthoFinder output from all 47 species | |
| MA_45897g0010 | No alias | assembly factor (eIF1A) of eIF1 | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06543 | No alias | assembly factor (eIF1A) of eIF1 & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0187.g025090 | No alias | assembly factor (eIF1A) of eIF1 & original description: CDS=1-438 | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| MF | GO:0003743 | translation initiation factor activity | IEA | Interproscan |
| BP | GO:0006413 | translational initiation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006576 | biogenic amine metabolic process | IEP | HCCA |
| BP | GO:0006595 | polyamine metabolic process | IEP | HCCA |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | HCCA |
| BP | GO:0006597 | spermine biosynthetic process | IEP | HCCA |
| BP | GO:0008215 | spermine metabolic process | IEP | HCCA |
| BP | GO:0008216 | spermidine metabolic process | IEP | HCCA |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0009309 | amine biosynthetic process | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0016849 | phosphorus-oxygen lyase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0033897 | ribonuclease T2 activity | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| BP | GO:0042401 | biogenic amine biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006196 | RNA-binding_domain_S1_IF1 | 32 | 93 |
| No external refs found! |
