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  5. Sam_g52366

Sam_g52366


Description : not classified & original description: none


Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52366
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00063620 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00085p00068720 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G13510 No alias Protein of Unknown Function (DUF239) 0.02 OrthoFinder output from all 47 species
AT3G48230 No alias Protein of Unknown Function (DUF239) 0.02 OrthoFinder output from all 47 species
AT5G18460 No alias Protein of Unknown Function (DUF239) 0.02 OrthoFinder output from all 47 species
Ala_g09383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42673.t1 Aspi01Gene42673 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55362.t1 Aspi01Gene55362 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69402.t1 Aspi01Gene69402 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0280.g062318 No alias not classified & original description: CDS=377-1795 0.02 OrthoFinder output from all 47 species
Dac_g09610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006653001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01007693001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01019916001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01026336001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os03g59240.1 LOC_Os03g59240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g28000.1 LOC_Os06g28000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g10530.1 LOC_Os07g10530 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g45170.1 LOC_Os08g45170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g08128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_1134g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g36199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo438522 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g112620.4.1 Solyc03g112620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc05g005010.3.1 Solyc05g005010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g071590.3.1 Solyc06g071590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g12228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02012 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020747_P001 Zm00001e020747 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005861 troponin complex IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR004314 Neprosin 235 446
IPR025521 Neprosin_propep 87 211
No external refs found!