Description : not classified & original description: none
Gene families : OG0002436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002436_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g52618 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g26337 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g34617 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene44520.t1 | Aspi01Gene44520 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z026400.1 | Ceric.1Z026400 | not classified & original description: pacid=50632644... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.38G014000.1 | Ceric.38G014000 | not classified & original description: pacid=50579540... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.38G014100.1 | Ceric.38G014100 | not classified & original description: pacid=50580648... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g30108 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0048.g013561 | No alias | not classified & original description: CDS=669-2111 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0069.g016565 | No alias | not classified & original description: CDS=37-546 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g01433 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g02488 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g03857 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16757 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g18545 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g34622 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14379 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003439 | ABC_transporter-like_ATP-bd | 89 | 171 |
| No external refs found! |
