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  5. Sam_g52674

Sam_g52674


Description : heavy chain of Dynein microtubule-based motor protein complex & original description: none


Gene families : OG0000220 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g52674
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene16697.t1 Aspi01Gene16697 heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46602.t1 Aspi01Gene46602 heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Aspi01Gene61616.t1 Aspi01Gene61616 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011391 No alias heavy chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Azfi_s2862.g113503 No alias not classified & original description: CDS=1724-2995 0.02 OrthoFinder output from all 47 species
Cba_g23634 No alias heavy chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021350.41 No alias Cytoskeleton.microtubular network.Dynein... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021590.1 No alias Cytoplasmic dynein 2 heavy chain 1 OS=Chlamydomonas reinhardtii 0.02 OrthoFinder output from all 47 species
Gb_31248 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.02 OrthoFinder output from all 47 species
Gb_31251 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.02 OrthoFinder output from all 47 species
Gb_31254 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.02 OrthoFinder output from all 47 species
Gb_31256 No alias Dynein-1-beta heavy chain, flagellar inner arm I1... 0.03 OrthoFinder output from all 47 species
Mp8g01590.1 No alias heavy chain of Dynein microtubule-based motor protein complex 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015235 No alias heavy chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0232.g026474 No alias heavy chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007018 microtubule-based movement IEA Interproscan
MF GO:0008569 minus-end-directed microtubule motor activity IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041589 DNAH3_AAA_lid_1 549 636
IPR041228 Dynein_C 2092 2387
IPR024743 Dynein_HC_stalk 963 1297
IPR035706 AAA_9 1324 1546
IPR041658 AAA_lid_11 1937 2084
IPR041466 Dynein_AAA5_ext 193 328
IPR011704 ATPase_dyneun-rel_AAA 25 161
IPR024317 Dynein_heavy_chain_D4_dom 691 947
IPR004273 Dynein_heavy_D6_P-loop 1792 1905
No external refs found!