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  5. Cba_g00902

Cba_g00902


Description : zinc metalloprotease *(OMA1) & original description: none


Gene families : OG0004100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g00902
Cluster HCCA: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
Cre06.g306650 No alias Protein degradation.peptidase families.metallopeptidase... 0.01 OrthoFinder output from all 47 species
Dcu_g01540 No alias zinc metalloprotease *(OMA1) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18497 No alias zinc metalloprotease *(OMA1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018475001 No alias Protein degradation.peptidase families.metallopeptidase... 0.01 OrthoFinder output from all 47 species
Sam_g23628 No alias zinc metalloprotease *(OMA1) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015748_P003 Zm00001e015748 zinc metalloprotease (OMA1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001915 Peptidase_M48 287 444
No external refs found!