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  5. Cba_g00917

Cba_g00917


Description : E3 ubiquitin ligase *(AIRP1) & original description: none


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g00917

Target Alias Description ECC score Gene Family Method Actions
AT2G44380 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
Ceric.1Z042300.1 Ceric.1Z042300 E3 ubiquitin ligase *(AIRP1) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g05770 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021903 No alias not classified & original description: CDS=1921-2982 0.02 OrthoFinder output from all 47 species
Solyc01g073890.3.1 Solyc01g073890 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004146 DC1 55 101
IPR004146 DC1 3 46
IPR004146 DC1 110 157
IPR004146 DC1 167 213
IPR001841 Znf_RING 301 343
No external refs found!