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  5. Cba_g01298

Cba_g01298 (UBP25)


Aliases : UBP25

Description : deubiquitinase *(UBP25) & original description: none


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01298

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00205690 UBP23,... Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
AT1G17110 UBP15 ubiquitin-specific protease 15 0.03 OrthoFinder output from all 47 species
AT5G57990 UBP23 ubiquitin-specific protease 23 0.03 OrthoFinder output from all 47 species
Adi_g007364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080212 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09377 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08916 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12934 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26899.t1 UBP23, Aspi01Gene26899 deubiquitinase *(UBP23) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49835.t2 UBP18, Aspi01Gene49835 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G067600.1 UBP23, Ceric.28G067600 deubiquitinase *(UBP23) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000663.67 UBP15 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000734.7 UBP23 Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g03145 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07912 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26924 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000696001 UBP15 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01014079001 UBP23 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01033166001 UBP18 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os05g43480.1 UBP25, LOC_Os05g43480 deubiquitinase (UBP25) 0.02 OrthoFinder output from all 47 species
Len_g45877 UBP23 deubiquitinase *(UBP23) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429414g0020 UBP18 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Mp1g03220.1 UBP25 Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp2g05560.1 UBP18 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Ore_g22576 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29641 UBP25 deubiquitinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01994 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50169 No alias deubiquitinase *(UBP15-21) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g005530.4.1 UBP23, Solyc07g005530 deubiquitinase (UBP23) 0.02 OrthoFinder output from all 47 species
Solyc07g056520.3.1 UBP25, Solyc07g056520 deubiquitinase (UBP25) 0.02 OrthoFinder output from all 47 species
Zm00001e027381_P003 UBP25, Zm00001e027381 deubiquitinase (UBP25) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 23 339
No external refs found!