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  5. Cba_g01674

Cba_g01674 (GRP2, ATGRP2, GR-RBP2)


Aliases : GRP2, ATGRP2, GR-RBP2

Description : not classified & original description: none


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01674

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00256900 GRP2, ATGRP2,... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AT1G60650 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 OrthoFinder output from all 47 species
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.04 OrthoFinder output from all 47 species
AT4G39260 CCR1, GR-RBP8,... cold, circadian rhythm, and RNA binding 1 0.02 OrthoFinder output from all 47 species
Adi_g014441 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g016091 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016847 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016848 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g068967 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084466 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106770 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g117859 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06710 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01618 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24232 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g37833 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44798 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52291 GR-RBP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00926 GR-RBP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01126 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15096 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18654.t1 GR-RBP3, Aspi01Gene18654 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06390 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G037800.1 GR-RBP4, GRP4,... not classified & original description: pacid=50619932... 0.03 OrthoFinder output from all 47 species
Ceric.09G066000.1 Ceric.09G066000 RNA chaperone *(RZ1) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.35G013300.1 GR-RBP3, Ceric.35G013300 RNA editing factor *(ORRM3) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g02153 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03970 GR-RBP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g24341 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03121 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04232 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021024001 GRP2, ATGRP2, GR-RBP2 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
LOC_Os03g61990.3 ATRZ-1A, LOC_Os03g61990 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Len_g21305 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02744 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21135 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24303 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25551 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_872107g0010 ATRBP31, CP31,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g31887 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46171 CCR1, GR-RBP8,... RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10436 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23738 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04562 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12344 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12375 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14490 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g17461 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29739 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18692 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c12_1830V3.1 ATRZ-1A, Pp3c12_1830 RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 OrthoFinder output from all 47 species
Pp3c12_23420V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.01 OrthoFinder output from all 47 species
Pp3c4_6610V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.02 OrthoFinder output from all 47 species
Ppi_g52954 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57632 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008093 ATRZ-1A RNA chaperone *(RZ1) & original description: CDS=129-794 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008411 No alias RNA chaperone *(RZ1) & original description: CDS=12-860 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009193 No alias not classified & original description: CDS=133-507 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020723 No alias not classified & original description: CDS=1-762 0.03 OrthoFinder output from all 47 species
Sam_g09618 No alias RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10757 No alias RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12557 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22222 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57119 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04956 No alias RNA chaperone *(RZ1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22300 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30660 GR-RBP3 RNA ediTing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011440_P001 Zm00001e011440 RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
Zm00001e028481_P002 GRP2, ATGRP2,... RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.03 OrthoFinder output from all 47 species
Zm00001e028502_P003 Zm00001e028502 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e033010_P001 Zm00001e033010 RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Zm00001e035491_P001 GR-RBP5, Zm00001e035491 RNA editing factor (ORRM) 0.03 OrthoFinder output from all 47 species
Zm00001e039608_P001 GR-RBP3, Zm00001e039608 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 75 145
No external refs found!