1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g01922

Cba_g01922 (DRT111)


Aliases : DRT111

Description : pre-mRNA splicing factor *(SFPS/DRT111) & original description: none


Gene families : OG0007273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007273_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01922

Target Alias Description ECC score Gene Family Method Actions
Ala_g10288 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.04 OrthoFinder output from all 47 species
Dac_g07931 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.03 OrthoFinder output from all 47 species
Ore_g10943 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.02 OrthoFinder output from all 47 species
Pir_g00559 DRT111 pre-mRNA splicing factor *(SFPS/DRT111) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e034397_P001 DRT111, Zm00001e034397 pre-mRNA splicing factor (SPF45/RBM17) 0.03 OrthoFinder output from all 47 species
Zm00001e036449_P002 DRT111, Zm00001e036449 pre-mRNA splicing factor (SPF45/RBM17) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 335 395
IPR000467 G_patch_dom 255 294
No external refs found!