Cba_g01943 (WRKY28, ATWRKY28)

Aliases : WRKY28, ATWRKY28

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g01943

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00208940	WRKY4,...	RNA biosynthesis.transcriptional activation.WRKY...	0.01	OrthoFinder output from all 47 species
AMTR_s00058p00090300	WRKY4,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00061p00050690	WRKY2, ATWRKY2,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AMTR_s00065p00201230	ATWRKY40,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00089p00116260	AtWRKY20,...	No description available	0.06	OrthoFinder output from all 47 species
AMTR_s00089p00116340	WRKY2, ATWRKY2,...	RNA biosynthesis.transcriptional activation.WRKY...	0.06	OrthoFinder output from all 47 species
AT1G80590	WRKY66, ATWRKY66	WRKY DNA-binding protein 66	0.02	OrthoFinder output from all 47 species
AT1G80840	ATWRKY40, WRKY40	WRKY DNA-binding protein 40	0.02	OrthoFinder output from all 47 species
AT2G40740	WRKY55, ATWRKY55	WRKY DNA-binding protein 55	0.02	OrthoFinder output from all 47 species
AT2G44745	No alias	WRKY family transcription factor	0.02	OrthoFinder output from all 47 species
AT2G46400	WRKY46, ATWRKY46	WRKY DNA-binding protein 46	0.03	OrthoFinder output from all 47 species
AT4G31800	WRKY18, ATWRKY18	WRKY DNA-binding protein 18	0.05	OrthoFinder output from all 47 species
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.05	OrthoFinder output from all 47 species
AT5G64810	ATWRKY51, WRKY51	WRKY DNA-binding protein 51	0.03	OrthoFinder output from all 47 species
Adi_g039781	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g114020	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g47915	WRKY43, ATWRKY43	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g39367	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g07730	WRKY61, ATWRKY61	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g29621	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene11216.t1	WRKY9, ATWRKY9,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene23582.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene52920.t1	ATWRKY71,...	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g15071	ATWRKY58, WRKY58	WRKY-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Ceric.17G009500.1	ATWRKY57,...	WRKY-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.31G018400.1	ATWRKY57,...	WRKY-type transcription factor & original description:...	0.09	OrthoFinder output from all 47 species
Dac_g26985	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g28011	ATWRKY30, WRKY30	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g10501	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10883	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13568	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g21871	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01001332001	WRKY3	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
GSVIVT01012196001	ATWRKY57, WRKY57	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01020864001	WRKY28, ATWRKY28	RNA biosynthesis.transcriptional activation.WRKY...	0.05	OrthoFinder output from all 47 species
GSVIVT01021397001	WRKY28, ATWRKY28	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01030258001	WRKY33, ATWRKY33	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
LOC_Os01g40260.1	ATWRKY50,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os01g47560.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g61080.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
LOC_Os02g08440.1	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os04g46060.1	LOC_Os04g46060	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
LOC_Os05g27730.1	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.04	OrthoFinder output from all 47 species
LOC_Os06g05380.1	WRKY72,...	transcription factor (WRKY)	0.12	OrthoFinder output from all 47 species
Len_g46515	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
MA_10425932g0020	WRKY75, ATWRKY75	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_11072g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_134559g0010	WRKY31, ATWRKY31	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_47307g0010	WRKY42, AtWRKY42	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
MA_49848g0010	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Msp_g07746	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g35201	WRKY46, ATWRKY46	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Msp_g48619	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g01131	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g17722	WRKY4	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g16470	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09044	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g08167	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g080890.3.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc05g012500.3.1	ATWRKY57,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc05g015850.4.1	WRKY75,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc09g015770.3.1	ATWRKY70,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Spa_g11950	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g18909	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g38478	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g08676	WRKY2, ATWRKY2	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g13422	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g20358	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e004183_P001	AtWRKY41,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e016343_P002	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e019446_P001	WRKY55,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e020229_P002	ATWRKY71,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e021431_P001	WRKY75,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e022331_P001	WRKY53,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e027140_P002	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
Zm00001e028011_P002	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e029445_P001	WRKY3, Zm00001e029445	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Zm00001e031518_P004	WRKY33,...	transcription factor (WRKY). transcription factor (WRKY33)	0.02	OrthoFinder output from all 47 species
Zm00001e037631_P001	ATWRKY40,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e038062_P002	WRKY4, Zm00001e038062	transcription factor (WRKY)	0.11	OrthoFinder output from all 47 species
Zm00001e040369_P001	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	353	409

External Links

No external refs found!

Cba_g01943 (WRKY28, ATWRKY28)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation