Cba_g01948


Description : not classified & original description: none


Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g01948
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00068p00062100 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G25960 No alias Protein of Unknown Function (DUF239) 0.01 OrthoFinder output from all 47 species
Ehy_g06829 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035338001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_36043 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g17517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018306 No alias not classified & original description: CDS=1-957 0.03 OrthoFinder output from all 47 species
Sam_g29599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g33712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo103145 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo80985 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g112620.4.1 Solyc03g112620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g38349 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR025521 Neprosin_propep 74 195
IPR004314 Neprosin 219 433
No external refs found!