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  5. Cba_g02227

Cba_g02227


Description : component *(Sm-D1) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex & original description: none


Gene families : OG0003223 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003223_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g02227

Target Alias Description ECC score Gene Family Method Actions
Aop_g20682 No alias component *(Sm-D1) of U1/U2/U4/U5-associated Sm... 0.03 OrthoFinder output from all 47 species
Cba_g38630 No alias component *(Sm-D1) of U1/U2/U4/U5-associated Sm... 0.03 OrthoFinder output from all 47 species
Ceric.39G023500.1 Ceric.39G023500 component *(Sm-D1) of U1/U2/U4/U5-associated Sm... 0.02 OrthoFinder output from all 47 species
Nbi_g40653 No alias component *(Sm-D1) of U1/U2/U4/U5-associated Sm... 0.03 OrthoFinder output from all 47 species
Sam_g42470 No alias component *(Sm-D1) of U1/U2/U4/U5-associated Sm... 0.04 OrthoFinder output from all 47 species
Solyc06g084310.4.1 Solyc06g084310 component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 5 69
No external refs found!