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  5. Lfl_g30958

Lfl_g30958 (PRT1)


Aliases : PRT1

Description : type-II-residues E3 ubiquitin ligase *(PRT1) & original description: none


Gene families : OG0002242 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g30958
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Aev_g20588 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g20369 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02417 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.03 OrthoFinder output from all 47 species
Ore_g19957 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.04 OrthoFinder output from all 47 species
Pir_g38680 PRT1 type-II-residues E3 ubiquitin ligase *(PRT1) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR000433 Znf_ZZ 431 464
No external refs found!