Cba_g02867 (WRKY43, ATWRKY43)

Aliases : WRKY43, ATWRKY43

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g02867
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00053p00216970	WRKY43,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00088p00164440	AtWRKY20,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00156p00038330	WRKY9, ATWRKY9,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.02	OrthoFinder output from all 47 species
Adi_g075271	WRKY4	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g117326	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g27533	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g42426	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene27646.t1	Aspi01Gene27646	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g64876	WRKY33, ATWRKY33	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g09789	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01018300001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01020864001	WRKY28, ATWRKY28	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01022259001	ATWRKY13, WRKY13	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
GSVIVT01024388001	No alias	No description available	0.02	OrthoFinder output from all 47 species
GSVIVT01030174001	WRKY54, ATWRKY54	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
GSVIVT01034148001	WRKY49, ATWRKY49	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_40261	WRKY75, ATWRKY75	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g40430.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os01g47560.1	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os02g53100.1	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Lfl_g24750	AtWRKY41, WRKY41	WRKY-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Mp1g24950.1	ATWRKY64, WRKY64	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Mp6g16800.1	WRKY48, ATWRKY48	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Pir_g05804	WRKY26	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g29855	WRKY28, ATWRKY28	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g63321	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003023	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: CDS=1-1497	0.02	OrthoFinder output from all 47 species
Sam_g22478	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g089960.3.1	Solyc01g089960	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Solyc02g088340.4.1	WRKY3, Solyc02g088340	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc04g051540.3.1	ATWRKY13,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc06g048870.3.1	WRKY55,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc08g067340.4.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc08g067360.3.1	ATWRKY40,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc12g056745.1.1	ATWRKY51,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Zm00001e016669_P001	ATWRKY13,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e020229_P002	ATWRKY71,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e023139_P001	Zm00001e023139	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e034148_P001	ATWRKY40,...	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species
Zm00001e039528_P002	WRKY54,...	transcription factor (WRKY)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0010274	hydrotropism	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	187	207

External Links

No external refs found!

Cba_g02867 (WRKY43, ATWRKY43)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation