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  5. Lfl_g30972

Lfl_g30972 (BAM1, BMY7, TR-BAMY)


Aliases : BAM1, BMY7, TR-BAMY

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g30972
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00150440 BMY8, BAM3,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
AMTR_s00050p00205080 BAM1, BMY7,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00155330 BMY8, BAM3,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
AMTR_s00098p00153370 RAM1, BMY1,... Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species
Als_g05689 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06607 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20028 BMY5, BAM6 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47527 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02140 BMY5, BAM6 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03563 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13700 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08482 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09882 BAM4, BMY6 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10740 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17119 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g35880.1 RAM1, BMY1,... beta amylase 0.03 OrthoFinder output from all 47 species
LOC_Os10g41550.1 BMY8, BAM3,... beta amylase 0.03 OrthoFinder output from all 47 species
Len_g08375 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13123 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14099 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03251 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09653 BMY5, BAM6 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g30432 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g28653 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35885 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37874 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g067660.3.1 BAM9, BMY3,... beta amylase 0.04 OrthoFinder output from all 47 species
Zm00001e002383_P001 BMY8, BAM3,... beta amylase 0.03 OrthoFinder output from all 47 species
Zm00001e037830_P001 BMY8, BAM3,... beta amylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0033176 proton-transporting V-type ATPase complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 137 563
No external refs found!