Cba_g03104


Description : E3 ubiquitin ligase component *(GID2) of GID ubiquitination complex & original description: none


Gene families : OG0002380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002380_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03104

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467574 No alias Protein RMD5 homolog OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dde_g10923 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species
GSVIVT01038533001 No alias Protein RMD5 homolog OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g14730 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008078 No alias E3 ubiquitin ligase component *(GID2) of GID... 0.03 OrthoFinder output from all 47 species
Zm00001e004470_P001 Zm00001e004470 catalytic component GID2 of ubiquitin protein ligase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR024964 CTLH/CRA 164 303
IPR027370 Znf-RING_euk 342 381
No external refs found!