Aliases : MSL5
Description : mechanosensitive ion channel *(MSL) & original description: none
Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g03379 | |
| Cluster | HCCA: Cluster_275 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G53470 | MSL4 | mechanosensitive channel of small conductance-like 4 | 0.03 | OrthoFinder output from all 47 species | |
| AT1G78610 | MSL6 | mechanosensitive channel of small conductance-like 6 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G12080 | MSL10, ATMSL10 | mechanosensitive channel of small conductance-like 10 | 0.02 | OrthoFinder output from all 47 species | |
| Als_g01071 | MSL4 | mechanosensitive ion channel *(MSL) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.02G100600.1 | MSL6, Ceric.02G100600 | mechanosensitive ion channel *(MSL) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g47236 | MSL5 | mechanosensitive ion channel *(MSL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g48251 | MSL5 | mechanosensitive ion channel *(MSL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g27378 | MSL5 | mechanosensitive ion channel *(MSL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01023959001 | MSL4 | Solute transport.channels.MSL mechanosensitive ion channel | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035448001 | MSL10, ATMSL10 | Solute transport.channels.MSL mechanosensitive ion channel | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g47320.1 | MSL5, LOC_Os04g47320 | mechanosensitive ion channel (MSL) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g28112 | MSL6 | mechanosensitive ion channel *(MSL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g15210 | MSL5 | mechanosensitive ion channel *(MSL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15988 | MSL5 | mechanosensitive ion channel *(MSL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07829 | MSL6 | mechanosensitive ion channel *(MSL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007089 | MSL4 | mechanosensitive ion channel *(MSL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g47206 | No alias | mechanosensitive ion channel *(MSL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo81632 | MSL5 | Solute transport.channels.MSL mechanosensitive ion channel | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g082040.3.1 | Solyc04g082040 | mechanosensitive ion channel (MSL) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g061980.4.1 | MSL10, ATMSL10,... | mechanosensitive ion channel (MSL) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g10758 | MSL4 | mechanosensitive ion channel *(MSL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11582 | MSL4 | mechanosensitive ion channel *(MSL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036222_P001 | MSL10, ATMSL10,... | mechanosensitive ion channel (MSL) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0016020 | membrane | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0015977 | carbon fixation | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006685 | MscS_channel | 763 | 966 |
| No external refs found! |
