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  5. Cba_g03702

Cba_g03702


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03702

Target Alias Description ECC score Gene Family Method Actions
Adi_g012490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g046888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46627.t1 Aspi01Gene46627 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036297 No alias not classified & original description: CDS=37-531 0.03 OrthoFinder output from all 47 species
Ceric.03G040000.1 Ceric.03G040000 not classified & original description: pacid=50571445... 0.02 OrthoFinder output from all 47 species
Ceric.31G021300.1 Ceric.31G021300 not classified & original description: pacid=50574171... 0.02 OrthoFinder output from all 47 species
Dac_g09225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g51990.1 LOC_Os01g51990 Zinc finger AN1 domain-containing stress-associated... 0.02 OrthoFinder output from all 47 species
LOC_Os03g57890.1 LOC_Os03g57890 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Lfl_g26238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43238 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006081 No alias not classified & original description: CDS=1-825 0.03 OrthoFinder output from all 47 species
Sam_g34638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g061770.2.1 Solyc11g061770 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 137 172
IPR002653 Znf_A20 23 45
No external refs found!