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  5. Cba_g03828

Cba_g03828


Description : not classified & original description: none


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03828

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00068760 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00254630 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00152840 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00152880 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00153750 evm_27.TU.AmTr_v1... UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00153970 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00170840 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00120870 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G36430 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT3G50130 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT3G50160 No alias Plant protein of unknown function (DUF247) 0.02 OrthoFinder output from all 47 species
AT5G11290 No alias Plant protein of unknown function (DUF247) 0.04 OrthoFinder output from all 47 species
AT5G22560 No alias Plant protein of unknown function (DUF247) 0.01 OrthoFinder output from all 47 species
Ala_g07039 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22026.t1 Aspi01Gene22026 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48414.t1 Aspi01Gene48414 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53577.t1 Aspi01Gene53577 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57926.t1 Aspi01Gene57926 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g13323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014791001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01014793001 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_08676 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_08678 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_20041 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_28287 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_36108 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Gb_36109 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37284 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_37285 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os01g21670.1 LOC_Os01g21670 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g38120.1 LOC_Os01g38120 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g15230.1 LOC_Os05g15230 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g07050.1 LOC_Os08g07050 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os08g42570.1 LOC_Os08g42570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g12840.1 LOC_Os09g12840 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os12g29620.1 LOC_Os12g29620 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g18264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436979g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_26069g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g22087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26636 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012986 No alias not classified & original description: CDS=1-1557 0.03 OrthoFinder output from all 47 species
Solyc02g093020.3.1 Solyc02g093020 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036342_P001 Zm00001e036342 Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 47 454
No external refs found!