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  5. Cba_g03917

Cba_g03917 (ATTZF1, ATCTH)


Aliases : ATTZF1, ATCTH

Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: none


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03917
Cluster HCCA: Cluster_269

Target Alias Description ECC score Gene Family Method Actions
AT3G55980 ATSZF1, SZF1 salt-inducible zinc finger 1 0.02 OrthoFinder output from all 47 species
Aob_g20797 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cre03.g146267 ATTZF1, ATCTH RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
Dde_g24267 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
GSVIVT01024728001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01025263001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os05g10670.1 LOC_Os05g10670 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Len_g21927 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Lfl_g28211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_98656g0010 No alias mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species
Mp6g00540.1 No alias mRNA-binding regulatory factor (TZF) 0.03 OrthoFinder output from all 47 species
Msp_g10175 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Nbi_g03800 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Pnu_g24839 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ppi_g10785 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010425 No alias regulatory factor *(TZF) of mRNA stress granule... 0.04 OrthoFinder output from all 47 species
Sam_g05121 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Sam_g49873 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Solyc05g052570.3.1 SZF2, ATSZF2,... mRNA-binding regulatory factor (TZF) 0.04 OrthoFinder output from all 47 species
Spa_g14602 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Spa_g24103 ATTZF1, ATCTH regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Zm00001e035805_P001 PEI1, Zm00001e035805 mRNA-binding regulatory factor (TZF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 117 138
No external refs found!