Aliases : CRR2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g03971 | |
| Cluster | HCCA: Cluster_241 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00270380 | OTP86,... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00111p00107400 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | OrthoFinder output from all 47 species | |
| AT5G16860 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004333 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g015809 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g022355 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g022409 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g040866 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101211 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g28165 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06600 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g06656 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06855 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30430 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g30433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30533 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g61444 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28673 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g29474 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g20191 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g38061 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34733.t1 | Aspi01Gene34733 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene65846.t1 | OSB3, Aspi01Gene65846 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011584 | No alias | not classified & original description: CDS=1-2754 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g015998 | OTP84 | not classified & original description: CDS=1-2163 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0050.g031009 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2424 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0074.g037414 | No alias | not classified & original description: CDS=1-2163 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0083.g038894 | CRR2 | not classified & original description: CDS=273-1679 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0087.g042376 | No alias | not classified & original description: CDS=1-2979 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0102.g044446 | No alias | not classified & original description: CDS=1-741 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0112.g045771 | No alias | not classified & original description: CDS=1-2433 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0216.g058493 | No alias | not classified & original description: CDS=1-2574 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0349.g066478 | OTP84 | not classified & original description: CDS=1-2082 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1707.g105997 | No alias | not classified & original description: CDS=1-2574 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G034400.1 | Ceric.06G034400 | not classified & original description: pacid=50619664... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G004700.1 | Ceric.14G004700 | not classified & original description: pacid=50634585... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G059200.1 | Ceric.14G059200 | not classified & original description: pacid=50634117... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z062400.1 | Ceric.1Z062400 | not classified & original description: pacid=50637425... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G007900.1 | Ceric.30G007900 | not classified & original description: pacid=50608292... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.30G025700.1 | CRR22, Ceric.30G025700 | not classified & original description: pacid=50609433... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.31G002400.1 | Ceric.31G002400 | not classified & original description: pacid=50574432... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.37G044800.1 | Ceric.37G044800 | not classified & original description: pacid=50617007... | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g483700 | OSB4 | Cell cycle.organelle machineries.DNA... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g27114 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07753 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23570 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06009 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g21131 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g23831 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26917 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Gb_16062 | OTP84 | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_24823 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g27650.1 | LOC_Os01g27650 | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18022 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19012 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g57437 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07120 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07126 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12945 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32907 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_23144g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| MA_31569g0010 | OTP82 | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g17741 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g17003 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g32624 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g42294 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16061 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g33905 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g37271 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01677 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g07049 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12523 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57161 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03485 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30296 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05887 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06423 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53021 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008324 | SNX1, ATSNX1 | regulatory factor SNX1 of Retromer protein recycling... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11962 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16299 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50108 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g009790.4.1 | Solyc09g009790 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g39673 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05655 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17154 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g22902 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23111 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29865 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g44229 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| MF | GO:0004484 | mRNA guanylyltransferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | HCCA |
| CC | GO:0005956 | protein kinase CK2 complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | HCCA |
| BP | GO:0006370 | 7-methylguanosine mRNA capping | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| MF | GO:0008192 | RNA guanylyltransferase activity | IEP | HCCA |
| BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| MF | GO:0019207 | kinase regulator activity | IEP | HCCA |
| MF | GO:0019887 | protein kinase regulator activity | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036260 | RNA capping | IEP | HCCA |
| MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0070568 | guanylyltransferase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1902554 | serine/threonine protein kinase complex | IEP | HCCA |
| CC | GO:1902911 | protein kinase complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| No external refs found! |
