1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g04318

Cba_g04318


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g04318

Target Alias Description ECC score Gene Family Method Actions
AT3G52800 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT4G22820 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g011055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g084995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g00814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17556 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035363 No alias not classified & original description: CDS=1-534 0.03 OrthoFinder output from all 47 species
Azfi_s0390.g067699 SAP10 not classified & original description: CDS=1-474 0.03 OrthoFinder output from all 47 species
Ceric.1Z032000.1 Ceric.1Z032000 not classified & original description: pacid=50577072... 0.02 OrthoFinder output from all 47 species
Ceric.31G021300.1 Ceric.31G021300 not classified & original description: pacid=50574171... 0.02 OrthoFinder output from all 47 species
Cre09.g400100 No alias Zinc finger A20 and AN1 domain-containing... 0.01 OrthoFinder output from all 47 species
Dde_g03107 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00577 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os02g32840.1 LOC_Os02g32840 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os03g57890.1 LOC_Os03g57890 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os05g23470.1 LOC_Os05g23470 Zinc finger AN1 domain-containing stress-associated... 0.01 OrthoFinder output from all 47 species
LOC_Os08g39450.1 LOC_Os08g39450 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Mp4g23510.1 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Msp_g07384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g35953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35009 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010371 No alias not classified & original description: CDS=1-684 0.03 OrthoFinder output from all 47 species
Solyc01g086960.3.1 Solyc01g086960 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Spa_g24353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003512_P001 Zm00001e003512 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e034520_P001 Zm00001e034520 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 115 152
IPR002653 Znf_A20 22 45
No external refs found!