Description : mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP trafficking complex & original description: none
Gene families : OG0000667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000667_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g04438 | |
| Cluster | HCCA: Cluster_241 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g082290 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g01583 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07392 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08268 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000194.40 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025009001 | No alias | RNA processing.messenger ribonucleoprotein particle... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g17010.1 | LOC_Os03g17010 | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g36767 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g18715 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g05319 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g09281 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g086400.2.1 | Solyc10g086400 | mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g32971 | No alias | mRNA-binding adaptor ALY/Tho4 of TREX/THO mRNP... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008289 | lipid binding | IEP | HCCA |
| CC | GO:0031011 | Ino80 complex | IEP | HCCA |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | HCCA |
| CC | GO:0097346 | INO80-type complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1904949 | ATPase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 111 | 179 |
| No external refs found! |
