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  5. Cba_g04529

Cba_g04529


Description : not classified & original description: none


Gene families : OG0000423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000423_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g04529
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Aop_g06680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g00700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030131001 No alias No description available 0.04 OrthoFinder output from all 47 species
Lfl_g01318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g00485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22143 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g34016 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g02046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g121220.2.1 Solyc03g121220 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g075960.1.1 Solyc09g075960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR008586 DUF868_pln 26 331
No external refs found!