Aliases : RPS7.1, RPS7
Description : component *(uS7c) of small plastid ribosomal-subunit proteome & original description: none
Gene families : OG0003075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003075_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g04878 | |
| Cluster | HCCA: Cluster_12 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s02071p00000020 | RPS7.1, RPS7,... | Protein biosynthesis.organelle translation... | 0.05 | OrthoFinder output from all 47 species | |
| ATCG00900 | RPS7.1, RPS7 | Ribosomal protein S7p/S5e family protein | 0.11 | OrthoFinder output from all 47 species | |
| ATCG01240 | RPS7.2 | ribosomal protein S7 | 0.11 | OrthoFinder output from all 47 species | |
| Aev_g27286 | RPS7.1, RPS7 | component *(uS7c) of small plastid ribosomal-subunit... | 0.23 | OrthoFinder output from all 47 species | |
| Ala_g14003 | RPS7.1, RPS7 | component *(uS7c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g16999 | RPS7.1, RPS7 | component *(uS7c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Aob_g04218 | RPS7.1, RPS7 | component *(uS7c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g13505 | No alias | component *(uS7m) of small mitoribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g15514 | No alias | component *(uS7m) of small mitoribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.05G043200.1 | RPS7.1, RPS7,... | component *(uS7c) of small plastid ribosomal-subunit... | 0.16 | OrthoFinder output from all 47 species | |
| Ceric.09G049800.1 | RPS7.1, RPS7,... | component *(uS7c) of small plastid ribosomal-subunit... | 0.16 | OrthoFinder output from all 47 species | |
| Ceric.18G054300.1 | RPS7.1, RPS7,... | component *(uS7c) of small plastid ribosomal-subunit... | 0.16 | OrthoFinder output from all 47 species | |
| Ceric.22G078200.1 | RPS7.1, RPS7,... | component *(uS7c) of small plastid ribosomal-subunit... | 0.16 | OrthoFinder output from all 47 species | |
| Ceric.28G052400.1 | RPS7.1, RPS7,... | component *(uS7c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G003200.1 | RPS7.1, RPS7,... | component *(uS7c) of small plastid ribosomal-subunit... | 0.16 | OrthoFinder output from all 47 species | |
| Ceric.30G067800.1 | RPS7.1, RPS7,... | component *(uS7c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.33G038600.1 | RPS7.1, RPS7,... | component *(uS7c) of small plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.34G004700.1 | RPS7.1, RPS7,... | component *(uS7c) of small plastid ribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.36G044900.1 | RPS7.1, RPS7,... | component *(uS7c) of small plastid ribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04094 | No alias | Ribosomal protein S7, mitochondrial OS=Marchantia... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_15254 | No alias | Ribosomal protein S7, mitochondrial OS=Triticum aestivum... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_37211 | No alias | Ribosomal protein S7, mitochondrial OS=Marchantia... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g16712.1 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os04g16798.1 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os04g16856.1 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os04g16886.1 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os07g25002.1 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os08g15246.1 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os10g21372.1 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os12g34045.1 | LOC_Os12g34045 | component mtRPS7 of small ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
| Len_g25805 | RPS7.1, RPS7 | component *(uS7c) of small plastid ribosomal-subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g03137 | RPS7.1, RPS7 | component *(uS7c) of small plastid ribosomal-subunit... | 0.19 | OrthoFinder output from all 47 species | |
| Lfl_g06400 | No alias | not classified & original description: none | 0.16 | OrthoFinder output from all 47 species | |
| Nbi_g22080 | No alias | component *(uS7m) of small mitoribosomal-subunit... | 0.11 | OrthoFinder output from all 47 species | |
| Pir_g04718 | No alias | component *(uS7m) of small mitoribosomal-subunit... | 0.21 | OrthoFinder output from all 47 species | |
| Pir_g06433 | RPS7.1, RPS7 | component *(uS7c) of small plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Sam_g00356 | No alias | component *(uS7m) of small mitoribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g03315 | No alias | component *(uS7c) of small plastid ribosomal-subunit... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g19770 | RPS7.1, RPS7 | component *(uS7c) of small plastid ribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Tin_g12479 | No alias | component *(uS7m) of small mitoribosomal-subunit... | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e039873_P001 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e042090_P001 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042267_P001 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042356_P001 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042499_P001 | RPS7.1, RPS7,... | component psRPS7 of small ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023798 | Ribosomal_S7_dom | 10 | 151 |
| No external refs found! |
