Aliases : LHCB1.4, LHB1B1
Description : component *(LHCb1/2/3) of LHC-II complex & original description: none
Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cba_g04979 | |
| Cluster | HCCA: Cluster_322 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00069220 | LHCB1.5, LHB1B2,... | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00088p00153020 | LHCB2.3, LHCB2,... | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00099p00139960 | LHCB5,... | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G29930 | LHCB1.3, CAB140,... | chlorophyll A/B binding protein 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G34420 | LHCB1.5, LHB1B2 | photosystem II light harvesting complex gene B1B2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g023263 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18726 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g00617 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g18768 | LHCB3*1, LHCB3 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g14415 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g18116 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g22172 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene10234.t1 | LHCB5, Aspi01Gene10234 | component *(LHCb5) of LHC-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene32417.t1 | LHCB2.2, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene32418.t1 | LHCB2.2, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene32419.t1 | LHCB2.2, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene53662.t1 | LHCB2.3, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene62512.t1 | LHCB2.1, LHCB2,... | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene71079.t1 | LHCB2.3, LHCB2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.10G082500.1 | LHCB1.4, LHB1B1,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G082600.1 | LHCB1.5, LHB1B2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G083100.1 | LHCB1.5, LHB1B2,... | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cre01.g066917 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.01 | OrthoFinder output from all 47 species | |
| Cre03.g156900 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.01 | OrthoFinder output from all 47 species | |
| Cre04.g232104 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g284250 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g548400 | LHCB2.2, LHCB2 | Photosynthesis.photophosphorylation.photosystem... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01021406001 | LHCB1.5, LHB1B2 | Chlorophyll a-b binding protein 2, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028204001 | LHCB1.5, LHB1B2 | Chlorophyll a-b binding protein 16, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_05837 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g52240.1 | LHCB1.5, LHB1B2,... | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Len_g20862 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g06710.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g06720.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp7g06790.1 | LHCB2.3, LHCB2, LHCB2.4 | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g07353 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g07354 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g37222 | CAB3, AB180, LHCB1.2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g37223 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g10111 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g28982 | LHCB2.3, LHCB2, LHCB2.4 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g36360 | LHCB2.2, LHCB2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g39616 | LHCB2.2, LHCB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c18_8100V3.1 | LHCB2.3, LHCB2,... | photosystem II light harvesting complex gene 2.1 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c2_36190V3.1 | LHCB2.3, LHCB2,... | photosystem II light harvesting complex gene 2.1 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c2_36500V3.1 | LHCB2.3, LHCB2,... | photosystem II light harvesting complex gene 2.1 | 0.01 | OrthoFinder output from all 47 species | |
| Smo407444 | LHCB3*1, LHCB3 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| Smo75552 | LHCB2.3, LHCB2, LHCB2.4 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g067330.1.1 | CAB3, AB180,... | Chlorophyll a-b binding protein 16, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g006140.2.1 | LHCB2.2, LHCB2,... | component LHCb1/2/3 of LHC-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g13888 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g39699 | LHCB1.5, LHB1B2 | component *(LHCb1/2/3) of LHC-II complex & original... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e020624_P001 | LHCB1.5, LHB1B2,... | component LHCb1/2/3 of LHC-II complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 30 | 196 |
| No external refs found! |
