Cba_g05214


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00153950 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00103p00113040 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g65570... 0.02 OrthoFinder output from all 47 species
Adi_g005709 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05713 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06359 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14757 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15782 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16084 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18255 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26615 LOI1, MEF11 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g28460 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06729 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s4317.g118723 No alias ssDNA-binding protein *(OSB) & original description: CDS=173-1369 0.08 OrthoFinder output from all 47 species
Cba_g29502 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g25290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08229 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16544 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g23963 OTP82 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g26473 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g32153 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21750 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033906001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g03276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04288 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05268 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g22243 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31919 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41108 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16805 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g43951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01500 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g63803 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g03497 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06094 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g16066 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000158 No alias not classified & original description: CDS=1-2931 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004580 No alias not classified & original description: CDS=1-2331 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017968 No alias not classified & original description: CDS=1-2673 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023491 No alias not classified & original description: CDS=1-2331 0.04 OrthoFinder output from all 47 species
Spa_g12442 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06632 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g12955 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27046 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g31184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 21 70
IPR046849 Eplus_motif 509 531
IPR002885 Pentatricopeptide_repeat 299 322
IPR002885 Pentatricopeptide_repeat 198 224
IPR002885 Pentatricopeptide_repeat 97 120
IPR002885 Pentatricopeptide_repeat 226 255
IPR002885 Pentatricopeptide_repeat 349 408
No external refs found!