Aliases : VFB4, SKIP2
Description : substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex & original description: none
Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0088.g042527 | VFB3 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0312.g064187 | VFB3 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g01194 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g18630 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03956 | VFB3 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06156 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g06190 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g39972 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g09628 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g10067 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0039.g012208 | VFB1 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0070.g016647 | VFB3 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g092990.1.1 | VFB4, SKIP2,... | component FBX of SCF E3 ubiquitin ligase complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12691 | VFB1 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12692 | VFB4, SKIP2 | substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR041567 | COI1_F-box | 42 | 79 |
| No external refs found! |
