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  5. Cba_g05247

Cba_g05247


Description : substrate adaptor *(NRL) of CUL3-based E3 ubiquitin ligase complex & original description: none


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05247
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00262560 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At5g48800... 0.02 OrthoFinder output from all 47 species
AT3G49970 No alias Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
Ala_g18363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03145 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Als_g39222 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aop_g10641 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Aop_g12703 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0128.g048748 No alias not classified & original description: CDS=51-2093 0.03 OrthoFinder output from all 47 species
Cba_g17052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.37G013500.1 Ceric.37G013500 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01010983001 No alias BTB/POZ domain-containing protein At1g03010... 0.02 OrthoFinder output from all 47 species
GSVIVT01028637001 No alias BTB/POZ domain-containing protein At5g48800... 0.02 OrthoFinder output from all 47 species
LOC_Os12g02540.1 LOC_Os12g02540 BTB/POZ domain-containing protein At3g08570... 0.02 OrthoFinder output from all 47 species
Lfl_g09090 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
MA_10429476g0010 RPT2 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g01164 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.06 OrthoFinder output from all 47 species
Nbi_g04368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17400 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016483 No alias not classified & original description: CDS=1-1938 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0175.g024554 No alias not classified & original description: CDS=1-1890 0.04 OrthoFinder output from all 47 species
Solyc02g092600.3.1 Solyc02g092600 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc09g048980.4.1 Solyc09g048980 BTB/POZ domain-containing protein At3g08570... 0.02 OrthoFinder output from all 47 species
Solyc09g061250.4.1 Solyc09g061250 BTB/POZ domain-containing protein At5g48800... 0.02 OrthoFinder output from all 47 species
Spa_g41434 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g46290 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 224 500
No external refs found!