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  5. Cba_g05295

Cba_g05295


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00071780 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g26540... 0.02 OrthoFinder output from all 47 species
AMTR_s00053p00090700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.03 OrthoFinder output from all 47 species
AMTR_s02193p00008230 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
Adi_g005518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059043 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g095327 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g111634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07500 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18934 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19077 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19247 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26592 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26694 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28002 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28530 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30417 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30769 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30788 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30819 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62803 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16820 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54043.t1 Aspi01Gene54043 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g03312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22369 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g25710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g58731 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.03 OrthoFinder output from all 47 species
Dac_g19071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17299 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40971 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43120 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g55568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02375 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05649 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07808 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16060 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57069 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g60422 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65182 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66342 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26414 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Smo105729 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.03 OrthoFinder output from all 47 species
Spa_g07089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13913 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22574 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g38392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41078 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 617 639
IPR002885 Pentatricopeptide_repeat 383 410
IPR002885 Pentatricopeptide_repeat 184 207
IPR002885 Pentatricopeptide_repeat 108 154
IPR002885 Pentatricopeptide_repeat 541 588
IPR002885 Pentatricopeptide_repeat 310 356
IPR002885 Pentatricopeptide_repeat 411 456
IPR002885 Pentatricopeptide_repeat 208 255
No external refs found!