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  5. Cba_g05841

Cba_g05841


Description : not classified & original description: none


Gene families : OG0003467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05841
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00213680 evm_27.TU.AmTr_v1... Reticulon-like protein B18 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00065p00202980 evm_27.TU.AmTr_v1... Reticulon-like protein B21 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G20590 No alias Reticulon family protein 0.03 OrthoFinder output from all 47 species
AT4G28430 No alias Reticulon family protein 0.03 OrthoFinder output from all 47 species
AT5G58000 No alias Reticulon family protein 0.04 OrthoFinder output from all 47 species
Aev_g22301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024361 No alias not classified & original description: CDS=126-2093 0.03 OrthoFinder output from all 47 species
Ceric.35G033400.1 Ceric.35G033400 not classified & original description: pacid=50581205... 0.03 OrthoFinder output from all 47 species
Dac_g01665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020595001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os08g17870.1 LOC_Os08g17870 Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_22853g0010 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g14200.1 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g08988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02236 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc07g053700.4.1 Solyc07g053700 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g02418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e024730_P001 Zm00001e024730 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 367 520
No external refs found!