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  5. Cba_g06389

Cba_g06389 (HSFB4, SCZ, AT-HSFB4)


Aliases : HSFB4, SCZ, AT-HSFB4

Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06389
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00075850 HSFA1B, ATHSF3,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
AMTR_s00073p00033500 HSFB4, SCZ,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
AT3G22830 AT-HSFA6B, HSFA6B heat shock transcription factor A6B 0.03 OrthoFinder output from all 47 species
AT4G11660 AT-HSFB2B, HSFB2B winged-helix DNA-binding transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT4G18880 HSF A4A, AT-HSFA4A heat shock transcription factor A4A 0.03 OrthoFinder output from all 47 species
AT4G36990 HSF4, HSFB1,... heat shock factor 4 0.04 OrthoFinder output from all 47 species
Aev_g17013 HSFA1E, ATHSFA1E transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17393 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04318 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08806 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene71625.t1 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0078.g038314 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Ceric.29G078200.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.08 OrthoFinder output from all 47 species
Dac_g11746 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13990 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18504 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31318 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020781001 HSFA4C, RHA1, AT-HSFA4C RNA biosynthesis.transcriptional activation.HSF (heat... 0.03 OrthoFinder output from all 47 species
GSVIVT01033257001 AT-HSFB3, HSFB3 RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
LOC_Os06g22610.1 AT-HSFA7A,... Heat stress transcription factor A-2a OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Lfl_g30505 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38313 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_8992661g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Pnu_g06083 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60061 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000353 HSFA1E, ATHSFA1E HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012750 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: CDS=1-2229 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015790 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021246 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: CDS=1-1665 0.03 OrthoFinder output from all 47 species
Sam_g40245 No alias HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g072060.3.1 HSFA2, ATHSFA2,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Solyc02g090820.3.1 HSF4, HSFB1,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc03g006000.3.1 HSF A4A,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc12g007070.2.1 AT-HSFC1, HSFC1,... transcription factor (HSF) 0.01 OrthoFinder output from all 47 species
Zm00001e001765_P002 HSFB4, SCZ,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 57 146
No external refs found!