1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g06489

Cba_g06489


Description : chromatin remodeling factor *(Rad5-like) & original description: none


Gene families : OG0002085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06489

Target Alias Description ECC score Gene Family Method Actions
Adi_g024199 No alias chromatin remodeling factor *(Rad5-like) & original... 0.02 OrthoFinder output from all 47 species
MA_42020g0010 No alias chromatin remodeling factor (Rad5-like) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 95 311
IPR001650 Helicase_C 437 538
IPR018957 Znf_C3HC4_RING-type 337 377
No external refs found!