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  5. Cba_g06694

Cba_g06694


Description : AP2-type transcription factor *(WRI/AIL) & original description: none


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06694
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00227390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00058p00216470 RAP2.7, TOE1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00077750 DRG, CKC, CKC1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00028460 BBM,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G51190 PLT2 Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G54320 WRI1, ATWRI1, ASML1, WRI Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G37750 DRG, CKC, CKC1, ANT Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G65510 AIL7 AINTEGUMENTA-like 7 0.03 OrthoFinder output from all 47 species
Adi_g015380 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Adi_g058145 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Adi_g084762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25494 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ala_g28572 BBM not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05705 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Als_g14196 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.06 OrthoFinder output from all 47 species
Als_g14197 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Als_g14935 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Als_g15824 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Als_g47612 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Aob_g20859 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aob_g32678 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g06262 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aop_g10604 TOE3 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene15519.t1 Aspi01Gene15519 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011313 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g025087 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0207.g057931 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g11379 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g31057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37569 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Ceric.32G008600.1 BBM, Ceric.32G008600 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Cre01.g009650 RAP2.7, TOE1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 OrthoFinder output from all 47 species
Dac_g06510 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g08905 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g10360 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g24256 RAP2.7, TOE1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01002536001 PLT3, AIL6 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01007388001 DRG, CKC, CKC1, ANT RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01009293001 DRG, CKC, CKC1, ANT RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01016764001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01025100001 RAP2.7, TOE1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01025307001 PLT2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01027345001 WRI1, ATWRI1, ASML1, WRI RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01029219001 AIL5, EMK, CHO1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
LOC_Os01g59780.1 WRI1, ATWRI1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
LOC_Os03g12950.1 DRG, CKC, CKC1,... no description available(sp|q84z02|crl5_orysj : 102.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g56050.1 DRG, CKC, CKC1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
LOC_Os05g32270.1 LOC_Os05g32270 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os06g43220.1 AP2, FLO2, FL1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
LOC_Os07g03250.1 DRG, CKC, CKC1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os07g13170.2 RAP2.7, TOE1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
LOC_Os07g39110.2 LOC_Os07g39110 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g29123 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Len_g38540 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g10876 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g14576 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
MA_121578g0010 DRG, CKC, CKC1, ANT transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
MA_98095g0010 No alias transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Nbi_g01472 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g10303 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g14049 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g29022 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.05 OrthoFinder output from all 47 species
Pir_g37453 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g28202 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Pp3c22_17870V3.1 Pp3c22_17870 target of early activation tagged (EAT) 2 0.01 OrthoFinder output from all 47 species
Ppi_g19044 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002296 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018230 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019681 AP2, FLO2, FL1 not classified & original description: CDS=1-681 0.03 OrthoFinder output from all 47 species
Sam_g01778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g05070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13728 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g064960.3.1 AP2, FLO2, FL1,... transcription factor (AP2) 0.01 OrthoFinder output from all 47 species
Solyc02g092050.3.1 DRG, CKC, CKC1,... transcription factor (AP2) 0.05 OrthoFinder output from all 47 species
Solyc03g123430.4.1 Solyc03g123430 transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Solyc04g077490.3.1 DRG, CKC, CKC1,... transcription factor (AP2) 0.05 OrthoFinder output from all 47 species
Solyc11g061750.2.1 PLT2, Solyc11g061750 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Spa_g07247 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g28499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38474 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Spa_g50963 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g51078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005817_P003 DRG, CKC, CKC1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Zm00001e006752_P001 AP2, FLO2, FL1,... transcription factor (AP2) 0.05 OrthoFinder output from all 47 species
Zm00001e034197_P002 ADAP, Zm00001e034197 transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Zm00001e038652_P002 DRG, CKC, CKC1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 54 105
No external refs found!