1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g07112

Cba_g07112


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07112

Target Alias Description ECC score Gene Family Method Actions
AT2G13600 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005632 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g028250 LOI1, MEF11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036720 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09730 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g17889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16833 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17033 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g16798 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07004 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21617 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35556 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g43404 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02401.t1 EMB2758, Aspi01Gene02401 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20358.t1 Aspi01Gene20358 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t1 CRR22, Aspi01Gene25991 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34740.t1 Aspi01Gene34740 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41281.t1 OTP84, Aspi01Gene41281 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41379.t1 Aspi01Gene41379 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45825.t1 Aspi01Gene45825 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46907.t1 REME1, Aspi01Gene46907 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52031.t2 Aspi01Gene52031 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63349.t1 Aspi01Gene63349 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70773.t1 OTP84, Aspi01Gene70773 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72349.t1 EMB2758, Aspi01Gene72349 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0544.g076391 No alias not classified & original description: CDS=1-906 0.05 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.05 OrthoFinder output from all 47 species
Cba_g04046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05714 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06556 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07181 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g11914 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13786 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20826 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20828 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32940 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67809 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G084700.1 VAC1, ECB2,... not classified & original description: pacid=50592179... 0.04 OrthoFinder output from all 47 species
Ceric.04G036800.1 Ceric.04G036800 not classified & original description: pacid=50632550... 0.02 OrthoFinder output from all 47 species
Ceric.04G095300.1 OTP84, Ceric.04G095300 not classified & original description: pacid=50630887... 0.02 OrthoFinder output from all 47 species
Ceric.12G090300.1 Ceric.12G090300 not classified & original description: pacid=50600499... 0.04 OrthoFinder output from all 47 species
Ceric.18G000100.1 CRR22, Ceric.18G000100 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.04 OrthoFinder output from all 47 species
Ceric.29G081800.1 VAC1, ECB2,... not classified & original description: pacid=50624309... 0.04 OrthoFinder output from all 47 species
Ceric.31G026600.1 CRR22, Ceric.31G026600 not classified & original description: pacid=50574263... 0.03 OrthoFinder output from all 47 species
Ceric.32G058000.1 Ceric.32G058000 not classified & original description: pacid=50598467... 0.03 OrthoFinder output from all 47 species
Ceric.33G050800.1 CRR22, Ceric.33G050800 not classified & original description: pacid=50606654... 0.03 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
Dac_g17043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32204 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08304 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g14626 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16793 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g30334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45110 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19684 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22016 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008721001 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.05 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g01393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18295 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28084 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g33510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g41161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44108 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54953 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g58768 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g59693 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07430 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17485 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g16922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27204 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13279 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64554 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56659 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57955 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g08388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo78092 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Spa_g03178 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12338 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28071 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28119 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 173 222
No external refs found!