Cba_g07378


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07378

Target Alias Description ECC score Gene Family Method Actions
Adi_g004703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g034178 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g11596 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13795 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g18317 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21218 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g25466 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g38989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g44810 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g06600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g20488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06903 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g39618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05294 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37347 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g37946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g70728 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01194.t1 Aspi01Gene01194 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01654.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02296.t1 Aspi01Gene02296 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02316.t1 Aspi01Gene02316 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02798.t1 Aspi01Gene02798 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05393.t1 Aspi01Gene05393 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06826.t1 CRR2, Aspi01Gene06826 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07235.t1 REME1, Aspi01Gene07235 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08082.t1 EMB2261, Aspi01Gene08082 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10220.t1 OTP84, Aspi01Gene10220 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10387.t1 REME1, Aspi01Gene10387 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17591.t1 Aspi01Gene17591 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t1 CRR22, Aspi01Gene25991 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28610.t1 REME1, Aspi01Gene28610 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34702.t1 Aspi01Gene34702 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38168.t1 Aspi01Gene38168 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41281.t1 OTP84, Aspi01Gene41281 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41379.t1 Aspi01Gene41379 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43974.t1 REME1, Aspi01Gene43974 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49892.t1 Aspi01Gene49892 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52031.t2 Aspi01Gene52031 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55895.t1 Aspi01Gene55895 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66051.t1 OTP84, Aspi01Gene66051 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66061.t3 Aspi01Gene66061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67320.t1 EMB2758, Aspi01Gene67320 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72349.t1 EMB2758, Aspi01Gene72349 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000814 CRR22 not classified & original description: CDS=1-2214 0.06 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.07 OrthoFinder output from all 47 species
Cba_g03404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05309 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12686 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18613 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35085 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g43844 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g72789 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.06 OrthoFinder output from all 47 species
Dac_g19560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g25885 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g03929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os10g30760.1 LOC_Os10g30760 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40920.1 LOC_Os10g40920 RNA editing factor (MEF13) 0.02 OrthoFinder output from all 47 species
Len_g08835 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17341 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g17706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18038 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18855 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g43648 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23499 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07585 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17466 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g20689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45870 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04305 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g24651 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38538 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g40116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g41304 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31283 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53018 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53554 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g55534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g102690.4.1 Solyc01g102690 Pentatricopeptide repeat-containing protein At3g49710... 0.04 OrthoFinder output from all 47 species
Solyc09g009950.4.1 Solyc09g009950 RNA editing factor (MEF10) 0.02 OrthoFinder output from all 47 species
Spa_g11331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16587 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03804 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21929 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41605 OTP81 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g44203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.04 OrthoFinder output from all 47 species
Zm00001e041694_P001 Zm00001e041694 Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 100 122
No external refs found!