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  5. Cba_g07557

Cba_g07557 (sks5)


Aliases : sks5

Description : EC_1.10 oxidoreductase acting on diphenol or related substance as donor & original description: none


Gene families : OG0000411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000411_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07557
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00093220 sks11,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 OrthoFinder output from all 47 species
AMTR_s00159p00040990 sks11,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.04 OrthoFinder output from all 47 species
AT1G21850 sks8 SKU5 similar 8 0.02 OrthoFinder output from all 47 species
AT1G55560 sks14 SKU5 similar 14 0.03 OrthoFinder output from all 47 species
AT1G76160 sks5 SKU5 similar 5 0.03 OrthoFinder output from all 47 species
AT3G13400 sks13 SKU5 similar 13 0.03 OrthoFinder output from all 47 species
AT4G12420 SKU5 Cupredoxin superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G66920 sks17 SKU5 similar 17 0.03 OrthoFinder output from all 47 species
Adi_g010803 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Adi_g076878 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Aev_g19338 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aev_g32395 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Als_g09372 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Als_g27093 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Als_g32346 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Als_g48778 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Aob_g04300 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11234.t1 sks5, Aspi01Gene11234 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ceric.02G005300.1 sks5, Ceric.02G005300 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ceric.02G106600.1 SKU5, Ceric.02G106600 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ceric.03G066500.1 SKU5, Ceric.03G066500 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Dac_g01695 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Dac_g03791 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Dac_g31878 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Dcu_g04889 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dcu_g46094 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ehy_g06856 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
GSVIVT01023902001 sks5 L-ascorbate oxidase homolog OS=Brassica napus 0.03 OrthoFinder output from all 47 species
GSVIVT01030441001 sks5 L-ascorbate oxidase homolog OS=Brassica napus 0.04 OrthoFinder output from all 47 species
Gb_09725 SKU5 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_17061 sks5 L-ascorbate oxidase homolog OS=Brassica napus... 0.04 OrthoFinder output from all 47 species
Gb_29247 sks4 L-ascorbate oxidase homolog OS=Brassica napus... 0.04 OrthoFinder output from all 47 species
LOC_Os05g40740.3 sks11, LOC_Os05g40740 L-ascorbate oxidase homolog OS=Brassica napus... 0.02 OrthoFinder output from all 47 species
LOC_Os07g02810.1 sks17, LOC_Os07g02810 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
LOC_Os10g36390.1 SKU5, LOC_Os10g36390 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g00683 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Len_g41387 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Len_g57846 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Lfl_g09007 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Lfl_g25260 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
MA_110832g0010 SKU5 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_161013g0010 sks5 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
Nbi_g06735 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Nbi_g06759 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Ore_g08138 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ppi_g13020 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ppi_g33219 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014773 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022549 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Sam_g17165 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Solyc01g056310.3.1 sks12, Solyc01g056310 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Solyc02g065170.3.1 sks17, Solyc02g065170 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
Solyc02g090360.3.1 sks17, Solyc02g090360 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
Solyc04g082140.3.1 sks5, Solyc04g082140 L-ascorbate oxidase homolog OS=Brassica napus... 0.06 OrthoFinder output from all 47 species
Solyc05g055710.3.1 sks12, Solyc05g055710 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Solyc07g052230.3.1 sks5, Solyc07g052230 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc08g079090.4.1 SKU5, Solyc08g079090 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g25437 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Spa_g50715 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Zm00001e001690_P001 sks3, Zm00001e001690 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e012961_P001 sks4, Zm00001e012961 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Zm00001e019468_P001 sks11, Zm00001e019468 L-ascorbate oxidase homolog OS=Brassica napus... 0.03 OrthoFinder output from all 47 species
Zm00001e027313_P002 sks11, Zm00001e027313 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species
Zm00001e028870_P001 sks11, Zm00001e028870 L-ascorbate oxidase homolog OS=Brassica napus... 0.03 OrthoFinder output from all 47 species
Zm00001e031971_P001 sks11, Zm00001e031971 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_N 51 163
IPR001117 Cu-oxidase_2nd 178 313
IPR011706 Cu-oxidase_C 397 528
No external refs found!