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  5. Cba_g07681

Cba_g07681 (MGP)


Aliases : MGP

Description : C2H2 subclass IDD transcription factor & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07681
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00106830 IDD2, AtIDD2,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
AT1G68130 IDD14, AtIDD14 indeterminate(ID)-domain 14 0.03 OrthoFinder output from all 47 species
AT2G02080 IDD4, AtIDD4 indeterminate(ID)-domain 4 0.05 OrthoFinder output from all 47 species
Als_g60888 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g17401 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g38909 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008481 IDD16, AtIDD16 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g24855 No alias component *(MED19) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Ehy_g29791 AtIDD12, IDD12 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01010283001 IDD5, AtIDD5 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01016867001 AtIDD7, IDD7 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os01g09850.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g13400.1 IDD16, AtIDD16,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g44050.1 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Lfl_g10958 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g61166 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pp3c14_9530V3.1 Pp3c14_9530 No annotation 0.02 OrthoFinder output from all 47 species
Solyc09g065670.3.1 MGP, Solyc09g065670 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Spa_g18185 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000780_P001 Zm00001e000780 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e000980_P002 IDD16, AtIDD16,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e010628_P002 MGP, Zm00001e010628 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035365_P003 MGP, Zm00001e035365 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 42 64
No external refs found!