Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00263110 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00156450 | REME1,... | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00063p00172440 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00077p00031710 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s02193p00008230 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g02330,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G48910 | LPA66 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g059409 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13233 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17031 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18256 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30577 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g01606 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g36004 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene09924.t1 | REME1, Aspi01Gene09924 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene33810.t1 | Aspi01Gene33810 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene63349.t1 | Aspi01Gene63349 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024817 | No alias | not classified & original description: CDS=20-3643 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0168.g054598 | No alias | not classified & original description: CDS=1-1869 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0529.g075791 | No alias | protein involved in PS-I assembly *(PYG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0655.g081100 | No alias | not classified & original description: CDS=1-2358 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G084700.1 | VAC1, ECB2,... | not classified & original description: pacid=50592179... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G036800.1 | Ceric.04G036800 | not classified & original description: pacid=50632550... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G014900.1 | Ceric.10G014900 | not classified & original description: pacid=50613343... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G031500.1 | OTP84, Ceric.10G031500 | not classified & original description: pacid=50611993... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G085300.1 | Ceric.11G085300 | not classified & original description: pacid=50596385... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G036800.1 | Ceric.12G036800 | not classified & original description: pacid=50601765... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G075900.1 | Ceric.19G075900 | not classified & original description: pacid=50576584... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G040700.1 | Ceric.20G040700 | not classified & original description: pacid=50566494... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G078800.1 | Ceric.22G078800 | not classified & original description: pacid=50613807... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G050800.1 | CRR22, Ceric.33G050800 | not classified & original description: pacid=50606654... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.33G060200.1 | Ceric.33G060200 | not classified & original description: pacid=50607485... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021035.24 | No alias | Pentatricopeptide repeat-containing protein At1g63080,... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g24618 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05747 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g05782 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g06512 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08184 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08966 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g10377 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16553 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16678 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g17237 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g26044 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26858 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g31896 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38468 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g39841 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g40955 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g40976 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g43330 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45932 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g47892 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g47935 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g49092 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05343 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22314 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g25734 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g35725 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g38179 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50967 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000178001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012201001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01017209001 | VAC1, ECB2, ATECB2 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01017365001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01021756001 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031251001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033190001 | OTP82 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033389001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01036142001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_36806 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g62910.1 | CRR2, LOC_Os01g62910 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g44210.2 | LOC_Os03g44210 | RNA editing factor (SEL1/PDM1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g64370.1 | LOC_Os03g64370 | Pentatricopeptide repeat-containing protein At5g52850,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g07620.1 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03404 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g03913 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g18565 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g24715 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g36973 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g53944 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06708 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g07419 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g12347 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32919 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g42868 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g43551 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g48394 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g04943 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10472 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g19745 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g22452 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g23758 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27459 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g27965 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g36959 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g12907 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18652 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13627 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57980 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g03133 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g03485 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g03495 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04620 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g04714 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05882 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g06828 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06959 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g13845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g33169 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g40980 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53729 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g56364 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g002988 | No alias | not classified & original description: CDS=1-2412 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004386 | No alias | not classified & original description: CDS=1-2367 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004510 | No alias | not classified & original description: CDS=121-2523 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0017.g007046 | No alias | not classified & original description: CDS=1-2853 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010124 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=208-2547 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0035.g011483 | No alias | not classified & original description: CDS=1-2124 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0086.g018405 | No alias | not classified & original description: CDS=1-2268 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0095.g019270 | No alias | not classified & original description: CDS=1-1617 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0144.g022950 | EMB2261 | not classified & original description: CDS=1-2124 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0206.g025782 | No alias | not classified & original description: CDS=1-2394 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0215.g026034 | OTP84 | not classified & original description: CDS=2081-4369 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0231.g026446 | No alias | not classified & original description: CDS=292-2991 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14924 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16013 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16320 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17245 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19460 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g21254 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g30207 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37180 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39953 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50534 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51766 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo105356 | No alias | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
| Smo442088 | CRR22 | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g065840.3.1 | OSB1, Solyc09g065840 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g082450.1.1 | Solyc09g082450 | RNA editing factor (YS1) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g15123 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12995 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g26504 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g30441 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e002552_P001 | Zm00001e002552 | RNA editing factor (SEL1/PDM1) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012422_P001 | OSB1, Zm00001e012422 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015440_P001 | CRR22, Zm00001e015440 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e015727_P001 | Zm00001e015727 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016923_P001 | CRR2, Zm00001e016923 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e020442_P001 | Zm00001e020442 | Pentatricopeptide repeat-containing protein At4g21300... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041048_P001 | OTP86, Zm00001e041048 | RNA editing factor (OTP86) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 227 | 255 |
| IPR002885 | Pentatricopeptide_repeat | 539 | 559 |
| IPR002885 | Pentatricopeptide_repeat | 429 | 459 |
| IPR002885 | Pentatricopeptide_repeat | 401 | 425 |
| IPR002885 | Pentatricopeptide_repeat | 199 | 225 |
| IPR002885 | Pentatricopeptide_repeat | 22 | 68 |
| IPR002885 | Pentatricopeptide_repeat | 325 | 372 |
| IPR002885 | Pentatricopeptide_repeat | 123 | 171 |
| IPR002885 | Pentatricopeptide_repeat | 461 | 507 |
| IPR002885 | Pentatricopeptide_repeat | 588 | 646 |
| No external refs found! |
